Windows own file permissions does not map to the Git file permissions so it may be a bit hard to change file permissions when you are on Windows. This is how you do it:
Lets assume the file script.sh needs to have the executable bit set. Use the command git ls-tree to inspect the file permissions:
C:\views\myproject>git ls-tree HEAD
100644 blob 55c0287d4ef21f15b97eb1f107451b88b479bffe script.sh
As you can see the file has 644 permission (ignoring the 100). We would like to change it to 755:
C:\views\myproject>git update-index --chmod=+x script.sh
C:\views\myproject>git status
# On branch master
# Changes to be committed:
# (use "git reset HEAD <file>..." to unstage)
#
# modified: script.sh
#
The file is now staged. Note that the file contents is not changed, only the meta data. We must commit the file so save the change:
C:\views\myproject>git commit -m "Changing file permissions"
[master 77b171e] Changing file permissions
0 files changed, 0 insertions(+), 0 deletions(-)
mode change 100644 => 100755 script.sh
Running git ls-tree again to see the change:
C:\views\myproject>git ls-tree HEAD
100755 blob 55c0287d4ef21f15b97eb1f107451b88b479bffe script.sh